The coverage report is generated with cacao version 0.2.1, using the following key settings:
Genome assembly: grch38
Mode: Hereditary cancer
Data sources - cancer loci:
Alignment quality threshold (MAPQ): 0
Alignment filename: SEQC-II_Normal-ready.bam
Target regions filename: NA
Callability levels (germline):
NO_COVERAGE: No coverage (zero sequencing depth)
LOW_COVERAGE: Sequencing depth from 1 to 11
CALLABLE: Sequencing depth from 12 to 99
HIGH_COVERAGE: Sequencing depth above 100
## ### Gene distribution